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* [http://icl.cs.utk.edu/hpcc/ HPCC Challange Benchmark] - uses seven tests to measure several different performance parameters. | * [http://icl.cs.utk.edu/hpcc/ HPCC Challange Benchmark] - uses seven tests to measure several different performance parameters. | ||
* [http://www.clustermonkey.net//content/view/38/27/ Beowulf Perforamnce Suite (BPS)] - Example results are [http://clustermonkey.net/download/kronos/bps-logs/ here]. | * [http://www.clustermonkey.net//content/view/38/27/ Beowulf Perforamnce Suite (BPS)] - Example results are [http://clustermonkey.net/download/kronos/bps-logs/ here]. | ||
+ | * [http://cmbp.clustermonkey.net/ Cluster Monkey Benchmark Project] - just started. It is based on the BPS. | ||
* [http://www.nas.nasa.gov/Resources/Software/npb.html NASA Parallel Benchmarks] - One of the most, if not the most, widely used set of benchmarks for clusters. | * [http://www.nas.nasa.gov/Resources/Software/npb.html NASA Parallel Benchmarks] - One of the most, if not the most, widely used set of benchmarks for clusters. | ||
− | * [ | + | * [http://www.intel.com/cd/software/products/asmo-na/eng/cluster/clustertoolkit/219848.htm Intel MPI Benchmarks] - freely available. |
* [http://perfbase.tigris.org/ perfbase] - a set of front end tools using a PostgreSQL database as backend, which together form a system for the management and analysis of the output of tests and experiments. | * [http://perfbase.tigris.org/ perfbase] - a set of front end tools using a PostgreSQL database as backend, which together form a system for the management and analysis of the output of tests and experiments. | ||
* [http://liinwww.ira.uka.de/~skampi/ SKaMPI] - a suite of tests designed to measure the performance of MPI. | * [http://liinwww.ira.uka.de/~skampi/ SKaMPI] - a suite of tests designed to measure the performance of MPI. | ||
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These are codes that you can download (freely) and use for benchmarking. Some of them have benchmark results available and some don't. | These are codes that you can download (freely) and use for benchmarking. Some of them have benchmark results available and some don't. | ||
− | + | * [http://www.cnn.com CNN] The CNN benchmark (just kidding) | |
* [http://www.gromacs.org/ Gromacs] - A great benchmark code. GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions.\ | * [http://www.gromacs.org/ Gromacs] - A great benchmark code. GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions.\ | ||
* [http://hmmer.janelia.org/ HMMER] HMMER is used for profiling hidden Markov models (profile HMMs) to do sensitive database searching using statistical descriptions of a sequence family's consensus. HMMER is a freely distributable implementation of profile HMM software for protein sequence analysis. | * [http://hmmer.janelia.org/ HMMER] HMMER is used for profiling hidden Markov models (profile HMMs) to do sensitive database searching using statistical descriptions of a sequence family's consensus. HMMER is a freely distributable implementation of profile HMM software for protein sequence analysis. | ||
* [http://gfs.sourceforge.net/ Gerris] - Gerris is an Open Source Free Software library for the solution of the partial differential equations describing fluid flow. | * [http://gfs.sourceforge.net/ Gerris] - Gerris is an Open Source Free Software library for the solution of the partial differential equations describing fluid flow. | ||
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'''Network Benchmarks''' | '''Network Benchmarks''' | ||
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* [http://www.scl.ameslab.gov/netpipe/ NetPIPE] - One of the best network benchmarks. It tests a range of packet sizes and measures the time (bandwidth). It can use MPI as the message sending mechanism so it allows you to also test MPI implementations. | * [http://www.scl.ameslab.gov/netpipe/ NetPIPE] - One of the best network benchmarks. It tests a range of packet sizes and measures the time (bandwidth). It can use MPI as the message sending mechanism so it allows you to also test MPI implementations. | ||
* [http://www.netperf.org/netperf/ Netperf] - Another good networking benchmark that is used frequently. | * [http://www.netperf.org/netperf/ Netperf] - Another good networking benchmark that is used frequently. | ||
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