[Beowulf] copying big files

Huntress Gary B NPRI HuntressGB at Npt.NUWC.Navy.Mil
Fri Aug 8 11:51:10 EDT 2008


UDPCast http://udpcast.linux.lu/ might be useful for this purpose.

Regards,

Gary Huntress
Code 4113
Naval Undersea Warfare Center
Newport, RI  02841
1-800-669-6892 x28990
Blackberry:  401 256-1916


 

-----Original Message-----
From: beowulf-bounces at beowulf.org [mailto:beowulf-bounces at beowulf.org] On Behalf Of Henning Fehrmann
Sent: Friday, August 08, 2008 11:37 AM
To: Beowulf
Subject: [Beowulf] copying big files

Hi everybody,

Coping a big file onto all nodes in a cluster is a rather common problem.
I would have thought that there might be a standard tool for distributing the files in an efficient way. So far, I haven't found one.

Assuming one has a network design which allows non blocking full duplex wire-speed connections between N/2 pairs of nodes where N is the number of nodes in the cluster. It is basically a non blocking coreswitch. 

In this case the following scheme would be convenient and rather simple:

The file is placed on node n1 and one builds a chain of nodes n1 , n2 .... nN.

One splits the file into many packages (p1..pM), lets say a fragment fits into one TCP package. In the first step n1 transmits the package p1 to node n2.
In the second step n1 transmits the package p2 to n2 and n2 transmits p1 to node n3.

The transmission of a single package is fast. The time of passing a particular package through the whole chain of nodes is short compared with time of the entire copying process. E.g., using jumbo frames a package can have the size of ca 10kB.
In Gb network the transmission time of a single package between nodes is of the order of 0.1 ms.  Even in a cluster with 1024 nodes it takes in an ideal case just 0.1s to pass a package from node n1 through all nodes to n1024.

On each node the package is stored and, in the end, one reassembles the file.
For big files (size >> 10Mb) the required time is approximately the same as one needs for copying the file between two nodes plus 0.1s.

One needs basically a daemon which handles copying requests and establishes the connection to next node in the chain.

Has somebody written such a tool?

Cheers,
Henning Fehrmann

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