[Beowulf] static pvm library won't link anymore

David Mathog mathog at caltech.edu
Fri Jul 6 13:24:08 EDT 2007



> > errors on Mandriva 2007.1 with gcc 4.1.2.  It's missing all sorts
> > of includes (unistd.h, stdlib.h) and has some funky extern declarations
> 
> afaik, this is only possible if you are somehow missing 
> some basic package like glibc-headers.  (you can find this out
> on an rpm system by "rpm -qf /usr/include/stdlib.h".)
> 

It isn't that, it's that the 3.4.5 (and 3.4.4 I assume) use forms
of C that gcc 4.1.x compiles are not happy with.  Here's one
discussion of it:
 
http://groups.google.com/group/comp.parallel.pvm/browse_thread/thread/34f97af6f7998375/41fd271b8443e8ea?lnk=st&q=%22diff+-r+-b+-B+pvm3%2Fconf%2FLINUX.def+pvm3orig%2Fconf%2FLINUX.def%22&rnum=1&hl=en#41fd271b8443e8ea

I've been working through the patches at the end of that thread, but
there still seem to be issues.

Regards,

David Mathog
mathog at caltech.edu
Manager, Sequence Analysis Facility, Biology Division, Caltech
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