[Beowulf] Re: [Bioclusters] FW: cluster newbie (fwd from gotero at linuxprophet.com)

Eugen Leitl eugen at leitl.org
Wed Jan 5 16:37:15 EST 2005


----- Forwarded message from Glen Otero <gotero at linuxprophet.com> -----

From: Glen Otero <gotero at linuxprophet.com>
Date: Wed, 5 Jan 2005 13:13:56 -0800
To: "Clustering,  compute farming & distributed computing in life science informatics" <bioclusters at bioinformatics.org>
Subject: Re: [Bioclusters] FW: cluster newbie
X-Mailer: Apple Mail (2.619)
Reply-To: "Clustering,  compute farming & distributed computing in life science informatics" <bioclusters at bioinformatics.org>

ROCKS doesn't include BLAST, EMBOSS, or ClustalW, but BioBrew does. 
BioBrew is based on ROCKS, and therefore has the same installation 
procedure (minus all the CD swapping). A new release of BioBrew that 
includes recent versions of BLAST, mpiBLAST, EMBOSS, and ClustalW is 
very near. Installation procedures won't change between the current 
version and the upcoming release. 

Glen 

On Jan 5, 2005, at 12:21 PM, Nick D'Angelo wrote: 


> After a quick glance at the install process, it looks very slick 
> indeed. 
> 
> However, is the Blast, EMBOSS and ClustalW included or does it need 
> to be 
> bundled in? 
> 
> 
> 
> -----Original Message----- 
> From: Matt Harrington [mailto:matt at msg.ucsf.edu] 
> Sent: Wednesday, January 05, 2005 3:07 PM 
> To: Clustering, compute farming & distributed computing in life 
> science 
> informatics 
> Subject: Re: [Bioclusters] FW: cluster newbie 
> 
> 
> 
> 
> I highly recommend ROCKS: 
> 
> http://www.rocksclusters.org 
> 
> i even use it for non-clustered compute nodes.  i've simplified my 
> Linux 
> life  
> around ROCKS for compute servers and Suse for graphics workstations. 
> 
> ---Matt 
> 
> _______________________________________________ 
> Bioclusters maillist  -  Bioclusters at bioinformatics.org 
> https://bioinformatics.org/mailman/listinfo/bioclusters 
> _______________________________________________ 
> Bioclusters maillist  -  Bioclusters at bioinformatics.org 
> https://bioinformatics.org/mailman/listinfo/bioclusters 
> 
> 
> 
Glen Otero Ph.D. 
Linux Prophet 
 



_______________________________________________
Bioclusters maillist  -  Bioclusters at bioinformatics.org
https://bioinformatics.org/mailman/listinfo/bioclusters


----- End forwarded message -----
-- 
Eugen* Leitl <a href="http://leitl.org">leitl</a>
______________________________________________________________
ICBM: 48.07078, 11.61144            http://www.leitl.org
8B29F6BE: 099D 78BA 2FD3 B014 B08A  7779 75B0 2443 8B29 F6BE
http://moleculardevices.org         http://nanomachines.net
-------------- next part --------------
A non-text attachment was scrubbed...
Name: not available
Type: application/pgp-signature
Size: 198 bytes
Desc: not available
URL: <http://www.clustermonkey.net/pipermail/beowulf/attachments/20050105/a8d3300f/attachment-0001.sig>
-------------- next part --------------
_______________________________________________
Beowulf mailing list, Beowulf at beowulf.org
To change your subscription (digest mode or unsubscribe) visit http://www.beowulf.org/mailman/listinfo/beowulf


More information about the Beowulf mailing list