CCL:Multiprocessor scheduling G98/Linda on a Linux cluster (fwd)

Eugen Leitl eugen at leitl.org
Fri Mar 21 10:18:25 EST 2003


---------- Forwarded message ----------
Date: Fri, 21 Mar 2003 09:18:15 -0500
From: Robert Swofford <swofford at wfu.edu>
To: CCL Listserv <chemistry at ccl.net>
Subject: CCL:Multiprocessor scheduling G98/Linda on a Linux cluster

We have a new Beowulf cluster and have recently installed Gaussian98 with the 
Linda parallel-processing utilities. If I understand correctly, the installed 
version of G98 (g98L?) recognizes when it's running on a cluster, and if 
requested, will execute the parallelized sections of the code on multiple 
processors. I see in the Link 0 section of the g98 input a variable, %NProc=N, 
which requests multiple processors (it's also available in default.route).

What I don't understand is how the batch scheduler sets aside the needed 
processors and identifies them to g98. We are running the portable batch 
scheduler (OpenPBS) with the Maui scheduler instead of the default OpenPBS 
FIFO scehduler. Do I just tell PBS the number of nodes to reserve? I can't see 
how that information gets from the scheduler to g98. Please respond off-list, 
and I will summarize for the list.

Can someone who is running g98/Linda on a similar system share with me your 
batch script and perhaps clear up my confusion? I hesitate to dig into the 
code when I know that others have figured this out!

Thanks in advance for your help!
Bob Swofford

-- 
Robert L. Swofford
Professor of Chemistry
Wake Forest University
Winston-Salem, NC 27109-7486
swofford at wfu.edu
http://www.wfu.edu/~swofford/
(336)-758-4490 Telephone
(336)-758-4656 FAX


-= This is automatically added to each message by mailing script =-
CHEMISTRY at ccl.net -- To Everybody  | CHEMISTRY-REQUEST at ccl.net -- To Admins
Ftp: ftp.ccl.net  |  WWW: http://www.ccl.net/chemistry/   | Jan: jkl at osc.edu







_______________________________________________
Beowulf mailing list, Beowulf at beowulf.org
To change your subscription (digest mode or unsubscribe) visit http://www.beowulf.org/mailman/listinfo/beowulf



More information about the Beowulf mailing list